Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRW----QEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSS----YVLCKWALDEQAREQAR-NGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLG-QPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 3WJ7 Chain:A ((18-339)) | ----------------VTGATGFVGSAVARVLEERGHRLRLLVRPTSDRSNIAELNAELAVGDLSDPDTLAPALKGVKILFHVAADY----RLWVPDPETMMKANVEGTRNLMLAALEAGVEKIIYCSSVAALGLRSDGVPADE-----TTPVSESQVIGIYKLSKYRAEQEVLRLIREKNLPAIIVNPSTPVGPRDIKPTPTGQMILDCASGNMPAYVETGLNIVHVDDVAEGHALALERGKIGEKYILGGENIMLGDLFRMVSQIAGVKPPAVKLKQSWLYPVALVSEWLARGFGIEPRVTRETLAMSKKLMFFSSDKAKKELGYAPRPA-RDAVTDAIAWFRQHG---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183423 for 2544 contacts (-72.1/contact) +
2D Compatibility (PS) -34690 + (NN) -23870 + (LL) 1240
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -263693.0 ( -103.65 by residue)
QMean score : 0.448
|
|
|