Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGLPMNLIWFRCDLRTTDNSALLAAAD-GRPCLALYLLSPAQWREHDDAPC--KVDFWLRNLGELQRQLAALNIPL------LVRDCGHWRQAPEVIGRLCRELGVGAVHVNQEYGVNEERRDQAVGQRLREQGVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALASDPLPD--AVPAFPRPADSLRRLWPAGEEVAQERLRDFADQHLADYHERRDFPALPGTSQLSPYLAAGVLSPRQCLDAALVANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRPFREETEALRWRQAPAELEAWQQGRTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIRHWLPELAGLERKAIHDP--------SSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA |
| 4U63 Chain:A ((28-491)) | -------IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI------REKSAGPLGGAQEWWLHH------SLAALSSSLEKAGGRLVLASG---DAERILRDLISETGADTVVWNRRYDPTGMATDKALKQKLRDDGLTVRSFSGQLLHEPSRLQTKSGGPYRVYTPFWRALEGSDEPHAPADPPKSLTAPKVWPKSEKLSNWKLLPTKPDWAKDFSDIWTPGETGALDKLDDFIDGALKGYEEGRDFPAKPATSLLSPHLAAGEISPAAVWHATKGLSRHIAS---NDISRFRKEIVWREFCYHLLFHFPELG-EKNWNDSFDAFSWRDDEKSFKAWTRGMTGYPIVDAGMRQLWQHGTMHNRVRMIVASFLIKHLLIDWRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDGDYVRRFVPELEKLERKYIHKPFEAPKDALKKAGVELGKTYPLPIVDHGKARERALAAY---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U63.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184956 for 3691 contacts (-50.1/contact) +
2D Compatibility (PS) -47805 + (NN) -23613 + (LL) 1240
1D Compatibility (HY) -31200 + (ID) 9200
Total energy: -295534.0 ( -80.07 by residue)
QMean score : 0.509
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