Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAISFRPMTEADLDAVLKIEYAAFSHPWT-RGIFSEGLKNYHCWLMFEGSQQVGHGVIQIILDEAHLLNITVKPESQGRGLGLRLLEHLMREAAGHQARECFLEVRASNQAAYRLYERYGFNEIGRRRDYYPAVGGREDALVMACTLFD
2CNS Chain:A ((7-146))
---------LSTTDLPAAWQIEQRAHAFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVVLDEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPI--
General information:
TITO was launched using:
RESULT:
Template:
2CNS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90808 for 988 contacts (-91.9/contact) +
2D Compatibility (PS) -15109 + (NN) -7503 + (LL) 572
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -126548.0 ( -128.09 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2CNS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CNS-query.scw
PDB file :
Tito_Scwrl_2CNS.pdb
: