Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRDLTDDVALMRPVIDALRASGCDPDRVLVRVGLPPGGLPAGRFPHSAQNLFWKAAADECGEEHVGLHLAEHLPAFHGLLLEYLFLSSDTFGAGLRHSLRYVRLLSDTLQAQLEVEGERAVLSLGESPAINRHFPEMLAGAVIRLFGALTEGEFKPLEVQLMNETGAPMERYRAVYGCPTILGMPRYALVFDAAVLDKPSRHAAPELLRMHESLARRQLAEVERLDLVRQVRELIGELLVDGGATLEQVAARLGMPARRL----RERLAMAGVRFNDLVTDYRCRLAKELLLKTDERIEVIVERTGFSEPSTFYRAFKRWVGETPVEFRRRGQQGRG |
2K9S Chain:A ((5-103)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWRE---DQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFR-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31634 for 599 contacts (-52.8/contact) +
2D Compatibility (PS) -10314 + (NN) -6314 + (LL) 16672
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -37890.0 ( -63.26 by residue)
QMean score : 0.585
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