Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIPSAIQLHKASKTLTLRYGE-DSYDLPAEFLRVHSPSAEVQGHGNPVLQYGKLNVGLVGVEPAGQYALKLSFDDGHDSGLFTWDYLYELATRKDQLWADYLAELASAGKSRDPDESVVKLML
2L6N Chain:A ((12-122))
----TGLKLKRKSRQLEISFDNGQQFTLSCELLRVYSPSAEVHGHGNPVLVTHKKNVNINAITPVGNYAVKLVFDDGHDTGLYSWKVLYDLASNQVDLWENYLARLRAAKASREP---------
General information:
TITO was launched using:
RESULT:
Template:
2L6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29660 for 712 contacts (-41.7/contact) +
2D Compatibility (PS) -12097 + (NN) -6907 + (LL) 1380
1D Compatibility (HY) -11600 + (ID) 2650
Total energy: -61534.0 ( -86.42 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2L6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6N-query.scw
PDB file :
Tito_Scwrl_2L6N.pdb
: