Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRVTLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVMSNEILLEANEWAGNLAGMASEEMDHPYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVGTIFSVLRCPNEYLNQNDTLREEA------FLQPGTTQVAAGYAIYGPQTMLMLTLGNGVKGFTLDRELGSFVLTHDNISVPESTAEFAINMSNQRHWEAPVKRYVEELLAGKEGPLGKNYNMRWIASMVADVHRILTRGGVFMYPRDAREPEKPGKLRLMYEANPMSFIIEQAGGAATNGTQRILDIKPENLHQRVAVFLGSKQEVERITGYHAE |
1DBZ Chain:A ((19-357)) | ---ITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLT----------EDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPN-------NTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDL--KEPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKS--KNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVEKVEKYLA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179006 for 2651 contacts (-67.5/contact) +
2D Compatibility (PS) -32954 + (NN) -14400 + (LL) 832
1D Compatibility (HY) -31200 + (ID) 6800
Total energy: -263528.0 ( -99.41 by residue)
QMean score : 0.488
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