Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
2O6B Chain:A ((5-144))
----PRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQS---
General information:
TITO was launched using:
RESULT:
Template:
2O6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101739 for 1042 contacts (-97.6/contact) +
2D Compatibility (PS) -15014 + (NN) -4570 + (LL) 784
1D Compatibility (HY) -20800 + (ID) 7000
Total energy: -148339.0 ( -142.36 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2O6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6B-query.scw
PDB file :
Tito_Scwrl_2O6B.pdb
: