Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPTGQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAIIVDIKDYM-HNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
3WX6 Chain:A ((7-166))
------LKVKGKTQGEIK----------------------ILAFKNDYDMPARLQEGLTPAAAARGTITLTKEMDRSSPQFLQALGKREMMEEFEITI-----------LFTYKFEKVLITHMDQYSP-------------IEEIKFTYSGYSLE-----IAGAANW------
General information:
TITO was launched using:
RESULT:
Template:
3WX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51456 for 757 contacts (-68.0/contact) +
2D Compatibility (PS) -11862 + (NN) -5419 + (LL) 2504
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -76533.0 ( -101.10 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_3WX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX6-query.scw
PDB file :
Tito_Scwrl_3WX6.pdb
: