Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQVQKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMKEEVENNRGE
1T8B Chain:A ((12-214))
-----------------ELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIALYQPEAGDLRMIMGIYKIVSDLERMGDEAENIAERAILLAEEP-PLKPYVNINFMSEIVKEMVNDSVISFIQQDTLLAKKVIEKDDTVDELYHQLERELMTYVLEDPRNIKRAMHLSFVARHYERIADHAENVAEAAIYLSEG---------------------
General information:
TITO was launched using:
RESULT:
Template:
1T8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105090 for 1679 contacts (-62.6/contact) +
2D Compatibility (PS) -22280 + (NN) -11843 + (LL) 2644
1D Compatibility (HY) -16000 + (ID) 4250
Total energy: -156819.0 ( -93.40 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1T8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8B-query.scw
PDB file :
Tito_Scwrl_1T8B.pdb
: