Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTTLARPYAKAAFEYAQAHQQLADWSAALGVLAAVSQDDTVRQLLKEPQLTSSAKAQSLIDVCGDKLNAPAQNFVRTVAENKRLELLPTIAEMYEQLKAEQEKSVEVEVTSAFTLSKEQQDKLAKALSARLSREVRLHASEDASLIGGVIIRAGDLVIDGSVRGKLAKLAEALKS
1ABV Chain:A ((1-105))
-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLS-GALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ABV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47051 for 793 contacts (-59.3/contact) +
2D Compatibility (PS) -11306 + (NN) -4881 + (LL) 6312
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -68626.0 ( -86.54 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1ABV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ABV-query.scw
PDB file :
Tito_Scwrl_1ABV.pdb
: