Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METV-VGLTAIAVALLIGLGALGTAIGFGLLGGKFLEGAARQPEMVPMLQVKMFIVAGLLDAVTMIGVGIALFFTFANPFVGQIAG
1IJP Chain:A ((1-77))
MENLNMDLLYMAAAVMMGLPAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIAMIAVGLGLYVMFA---------
General information:
TITO was launched using:
RESULT:
Template:
1IJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48136 for 471 contacts (-102.2/contact) +
2D Compatibility (PS) -7942 + (NN) -3893 + (LL) 228
1D Compatibility (HY) -13200 + (ID) 2100
Total energy: -75043.0 ( -159.33 by residue)
QMean score : 0.142
(partial model without unconserved sides chains):
PDB file :
Tito_1IJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IJP-query.scw
PDB file :
Tito_Scwrl_1IJP.pdb
: