Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKPVCLVVAMTPKRGIGINNGLPWPHLTTDFKHFSRVTKTTPEEASRLNGWLPRKFAKTGDSGLPSPSVGKRFNAVVMGRKTWESMPRKFRPLVDRLNIVVSSSLKEEDIAAEKPQAEGQQRVRVCASLPAALSLLEEEYKDSVDQIFVVGGAGLYEAALSLGVASHLYITRVAREFPCDVFFPAFPGDDILSNKSTAAQAAAPAESVFVPFCPELGREKDNEATYRPIFISKTFSDNGVPYDFVVLEK
2BL9 Chain:A ((25-237))
--GTKNEPFSPRTFRGLGNKGTLPWKCNSVDMKYFSSVTTYVDESKYEKLKWKRERYLRMEA---------KLQNVVVMGRSSWESIPKQYKPLPNRINVVLSKTLTKED---------VKEKVFIIDSIDDLLLLLKKL---KYYKCFIIGGAQVYRECLSRNLIKQIYFTRINGAYPCDVFFPEFDES-------EFRVTSV----------------------------SEVYNSKGTTLDFLVYSK
General information:
TITO was launched using:
RESULT:
Template:
2BL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83868 for 1276 contacts (-65.7/contact) +
2D Compatibility (PS) -20434 + (NN) -9852 + (LL) 2804
1D Compatibility (HY) -16000 + (ID) 3150
Total energy: -130500.0 ( -102.27 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_2BL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL9-query.scw
PDB file :
Tito_Scwrl_2BL9.pdb
: