Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPKPKPWVQTEGPEKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGTQVYEDYNCTLNQTNIENNNNKFYIIQLLQDSNRFFTCWNHWGRVGEVGQSKINHFTRLEDAKKDFEKKFREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDLDVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGGQSLEELSSHFYTVIPHNFGHSQPPPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQLLDSGAPEYKVIQTYLEQT-GSNHRCPTLQ--HIWKVNQEGEEDRFQAHSKLGNRKLLWHGTNMAVVAAILTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHH---VGYMFLGEVALGREHHINTDNPSLKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFSQSEYLIYQESQCRLRYLLEVHL |
| 2RD6 Chain:A ((8-344)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQDLIKMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQGSSDSQILD-LSNRFYTLIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKD----PIDVNYEKLKTDIKVVDRDSEEAEIIRKYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVSKSANY-----CHTSQGDPIGLILLGEVALGNMYELKHAS-HISKLPKGKHSVKGLGKTTPDPSAN--ISLDG--VDVPLGTGISSG-VNDTSLLYNEYIVYDIAQVNLKYLLKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137933 for 2555 contacts (-54.0/contact) +
2D Compatibility (PS) -35420 + (NN) -23224 + (LL) 11980
1D Compatibility (HY) -28400 + (ID) 6400
Total energy: -219397.0 ( -85.87 by residue)
QMean score : 0.328
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