Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPANYTCTRPDGDNTDFRYFIYAVTYTVILVPGLIGNILALWVFYGYMKETKRAVIFMINLAIADLLQVLSLPLRIFYYLNHDW-PFGPGLCMFCFYLKYVNMYASIYFLVCISVRRFWFLMYP---FRFHDCKQKYDLYISIAGWLIICLACVLFPLLRTSD-DTSGNRTKCFVD--LPTRNVNLAQSVVMMTIGELIGFVTPLLIVLYCTWKTVLSLQDKYPMAQDLGEKQKALK----MILTCAGVFLICFAPYHFSFPLDFLVKSNEIKSCLARRVILIFHSVALCLASLNSCLDPVIYYFSTNEFRRRL------SRQDLHDSIQLHAKSFVSNHTASTMTPELC |
3C9L Chain:A ((55-332)) | ------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHA----IMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFV---VHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP--------IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---DD---E------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258587 for 2232 contacts (-115.9/contact) +
2D Compatibility (PS) -26515 + (NN) -9301 + (LL) 5132
1D Compatibility (HY) -22400 + (ID) 3350
Total energy: -315021.0 ( -141.14 by residue)
QMean score : 0.248
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