Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPEETSVYLDYYYATSPNSDIRETHSHVPYTSVFLPVFYTAVFLTGVLGNLVLMGALHFKPGSRRL---IDIFIINLAASDFIFLV-TLP------LWVDKEASLGLWRTGSFLCKGSSYMISVNMHCSVLLLTCMSVDRYLAIVWPVVSRKFRRTDCAYVVCASIWFISCLLGLPTLLSREL-TLIDDKPYCAEKKATPIKLIWSLVALI-----FTFFVPLLSIVTCYCCIARKLCAHYQQSGKHNK------KLKKSIKIIFIVVAAFLVSWLPFNTFKFLAIVSGLRQEHYLPSAILQLGMEVSGPLAFANSCVNPFIYYIFDSYIRR---AIVHCLCPCLKNYDFGSSTETSDSHLTKALSTFIHAEDFARRRKRSVSL |
| 4BWB Chain:A ((7-327)) | ------------------NSDL-DVNTDI-YSKVLVTAIYLALFVVGTVGNGVTLFTLA-----QSLQSRVDYYLGSLALSDLLILLFALPVDLYNFIWVHHP-----WAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTATLRVVIQLNTFMSFLFPMLVASILNTVAARRLTVMV--------EPGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACLC------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224989 for 1988 contacts (-113.2/contact) +
2D Compatibility (PS) -27711 + (NN) -770 + (LL) 3512
1D Compatibility (HY) -24000 + (ID) 3850
Total energy: -277808.0 ( -139.74 by residue)
QMean score : 0.170
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