Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSVSPAGPSAGAVPNATAVTTVRTNASGLEVPLFHLFARLDEELHGTFPGLWLALMAVHGAIFLAGLVLNGLALYVFCCRTRAKTPSVIYTINLVVTDLLVGLSLPTRFAVYYGARGCLRCAFPHVLG-------YFLNMHCSI---LFLTCICVDRYLAIVRPEGSRRCRQPACARAVCAFVWLAAGAVTLSVLGVTGSR---------------PCCRVFAL-------TVLEFLLPLLVISVFTGRIMCALSRPGLLHQGRQR--RVRAMQ----LLLTVLIIFLVCFTPFHARQVAVALWPDMPHHTSLV-VYHVAVTLSS----LNSCMDPIVYCFVTSGFQATVRGLFGQHGEREPSSGDVVSMHRSSKGSGRHHILSAGPHALTQALANGPEA |
| 4BV0 Chain:A ((24-316)) | ---------------------------------------------------------AIYLALFVVGTVGNGVTL--FTLARK-------SRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHP-----LMSRSRTKKFISAIWLASALLAIPMLFTVGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLFPMLVASILNTVIARRLTV--MVH-----PGRVQALRRGVLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230075 for 1537 contacts (-149.7/contact) +
2D Compatibility (PS) -22687 + (NN) -8928 + (LL) 5520
1D Compatibility (HY) -26800 + (ID) 3300
Total energy: -286270.0 ( -186.25 by residue)
QMean score : 0.106
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