Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNN----LTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKS------GPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQE---------NHSRILP--ENFGSVRS--------QLSSSSKFIPGVPTCFEIKPEENSDVHEL-------------RVKRSVTRIKK-------RSRSVFYRLTILILVFAVSWMPLHLFHVVTDF-------NDNLISNRHFKLVYCICHLLGMMSCCLNPILYGFLNNGIKADLVSLIHCLHM |
| 3OE8 Chain:A ((50-479)) | ------------------------------------------FLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVA--NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYV--GVWIPALLLTIPDFIFANVSEADD---------RYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG--VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWI-SITEALAFFHCCLNPILYAFL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268754 for 2524 contacts (-106.5/contact) +
2D Compatibility (PS) -37530 + (NN) -4755 + (LL) 4588
1D Compatibility (HY) -27200 + (ID) 4500
Total energy: -338151.0 ( -133.97 by residue)
QMean score : 0.224
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