Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNRTSVTDFILLGLTDNPQLQVVIFSFLFLTYVLSVTGNLTIISLTLLDSHLKTPMYFFLRNFSLE------ISFTSVCNPRFLISILTGDKSISYNACAAQLFFFIFLGSTEFFLLASMSYDCYVAICKPLHYTTIMSDRICYQLIISSWLAGFLVIFPPL-------AMGLQLDFCDSNVIDHFTCDSAPLLQISCTDTSTLELMSFILALFTL--ISTLILVILSYTYIIRTILRIPSAQQR----KKAFSTCSSHVIVVSISY--------GSCIFMYVKTSAKEGVALTKGVAILNTSVAPMLNPFIYTLRNQQVKQAFKDVLRKISHKKKKH |
| 3DQB Chain:A ((42-315)) | --------------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTT-----LYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAF-TWVMALACAAPPLVGWSRYIPEGMQ---CSCG-IDYYTPHEE-------TNNE-----SFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSA-VYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179191 for 1800 contacts (-99.6/contact) +
2D Compatibility (PS) -24840 + (NN) -3905 + (LL) 4128
1D Compatibility (HY) -23600 + (ID) 3050
Total energy: -230458.0 ( -128.03 by residue)
QMean score : 0.234
|
|
|