Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNQSSTPGFLLLGFSEHPGLERTLFVVVLTSYLLTLVG---NTLIILLSALDPKLHSPMYFFLSNLSFLDL-----CFTTSCVPQML-VNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSC-------EDTSYNEIQVAVASVFILVVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA-------QERGKFFG-------LFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS |
| 2HPY Chain:A ((48-313)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVA-FTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164403 for 1698 contacts (-96.8/contact) +
2D Compatibility (PS) -23188 + (NN) 4367 + (LL) 3896
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -183278.0 ( -107.94 by residue)
QMean score : 0.064
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