Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMIKKNASSEDFFILLGFSNWPQLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLHTPMYFFLSNLSFLDLCHTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGIAECVLLVVMSYDRYVAVCRPLHYTVLMHPRFCHLLAAASWVIGFTISALHSSFTFWVPLCGHRLVDHFFCEVPALLRLSC-VDTHA------NELTLMVMSSIFVLIPLILILTAYG----AIARAVLSMQSTTGLQKVFRTCGAHLMVVSLFF----IPVMCMYLQPPSENSPDQGKF---IALFYTVVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK
3CAP Chain:A ((55-314))------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMALACAA--------PPLVGWSRY------IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-


General information:
TITO was launched using:
RESULT:

Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205732 for 1734 contacts (-118.6/contact) +
2D Compatibility (PS) -25082 + (NN) -11041 + (LL) 5196
1D Compatibility (HY) -20400 + (ID) 3000
Total energy: -260059.0 ( -149.98 by residue)
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_3CAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CAP-query.scw
PDB file : Tito_Scwrl_3CAP.pdb: