Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFYHVGQAAFELLTSSFILVGFSDRPHLELIVFVVVLIFYLLTLLG---NMTIVLLSALDSRLHTPMYFFLANLSFLDMCFTTGSIPQMLYN------LWGPDKTISYVGCAIQLYFVLALGGVECVLLAVMAYDRYAAVCKPLHYTIIMHPRLCGQLASVAWLSGFGNSLIMAPQTLMLPRCGHRRVDHFLCEMPALIGMAC-------VDTMMLEALAFALAIFII--LAPLILILISYGYVGGTVLRIKSAAGRK-------KAFNTCSSHLIVVSL--------FYGTIIYMYLQPANTYSQDQGKFLTL--FYTIVTPSVNPLIYTLRNKDVKEAMKKVLGKGSAEI |
| 1U19 Chain:A ((48-326)) | ----------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGP------TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS-----NFRFGENHA----IMGVAFTWVMALACAAPPLVGWSR---YIPE-----GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202033 for 1790 contacts (-112.9/contact) +
2D Compatibility (PS) -24568 + (NN) -1576 + (LL) 5816
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -226111.0 ( -126.32 by residue)
QMean score : 0.184
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