Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKSMEIEFILLGLTDDPQLQIVIFLFLFLNYTLSLMGNLIIIILTLLDPRLKTPMYFFLRNFSFLEVIFTTVCIPRFLITIVTRDKTISYNNCATQLFFILLPGVTEFYLLAAMSYDRYVAICKPLHYPIIMSSKVCYQLVLSSWVTGFLIIFPPLVMGLKLDFCASKTIDHFMCETSPILQISCTDTHVLELMSFTLAVVTLVVTLVLVILSYTCIIKTILKFSSAQQRN----KAFSTCTSHMIVVSMT-------YGSCIFMYIKPSAKERVTVSKGVALLYTSIAPLLNPFIYTLRNQQVKEVFWDVLQKNLCFSKRPF
1L9H Chain:A ((43-328))--------------------LAAYMFLLIMLGFPI----NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLV-------GWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQ----FRNCMVTTLCCGKNPL


General information:
TITO was launched using:
RESULT:

Template: 1L9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -257169 for 2169 contacts (-118.6/contact) +
2D Compatibility (PS) -26597 + (NN) 2658 + (LL) 2928
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -281680.0 ( -129.87 by residue)
QMean score : 0.194

(partial model without unconserved sides chains):
PDB file : Tito_1L9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9H-query.scw
PDB file : Tito_Scwrl_1L9H.pdb: