Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTII---GNLLIILTISSDSHLHTPMYFFLSNLSFADICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFFIAFGCLDNLLLTMT-------AYDRFVAICYPLHYTVIMNPRLCGLLVLGSWCISVMGSLLETLTILRLSFCTNMEIPHFFC--DPSEVLKLACSDTFINN--------IVMYFVTIVLGVFPLCGILFSYSQIFSSVLRVSARG-------QHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTM------VTPMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS |
| 2Y03 Chain:A ((8-299)) | -----------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDP------GCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR---------SRVMLMREHKALKTLGIIMGVFTLCW---LPFFLVNIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -181035 for 1666 contacts (-108.7/contact) +
2D Compatibility (PS) -24417 + (NN) 621 + (LL) 5292
1D Compatibility (HY) -28000 + (ID) 3450
Total energy: -230989.0 ( -138.65 by residue)
QMean score : 0.080
|
|
|