Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPENFTRVTEFILTGVSSCPELQIPLFLVFLVLYGLTMAGNLGIITLTSVDSRLQTPMYFFLQHLALINLGNSTVIAPKMLINFLVKKKTTSF--YECATQLGGFLFFIVSEVIMLALMAYDRYVAICNPLLYMVVVSRRLCLLLVSLTYLYGFSTAIVVSSYVFSVSYCSS--NIINHFYCDNVPLLALSCSDTYLPETVVFISAATNVVGS---------LIIVLVS---YFNIVLSILKICSSEGRK--------KAFSTCASHMMAVTIFYGTLLFMYVQPRSNHSLDTDDKMASVFYTL--VIPMLNPLIYSLRNKDVKTALQRFMTNLCYSFKTM |
| 2YCX Chain:A ((11-294)) | ---------------------EAGMSLLMALVVL--LIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTR---------------ARAKVIICTVWAISALVSFLPIMMHWWRDEDP-QALKCYQD--PGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDL-VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186922 for 1783 contacts (-104.8/contact) +
2D Compatibility (PS) -26022 + (NN) -7872 + (LL) 4784
1D Compatibility (HY) -20800 + (ID) 3650
Total energy: -240482.0 ( -134.87 by residue)
QMean score : 0.260
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