Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLCHRGGQLIVPIIPLCPEHSCRGRRLQNLLSGPWPKQPMELHNLSSPSPSLSSSVLPPSFSPSPSSAPSAFTTVGGSSGGPCHPTSSSLVSAFLAPILALEFVLGLVGNSLALFIFCIHTRPWTSNTVFLVSLVAADFLL-ISNLPLRVDYYLLHETWRFGAAACKVNLFMLSTNRTASVVFLTAIALNRYLKVVQPHHVLSRASVGAAARVAGGLW-----VGILLLNGHLL-------LSTFSGPSCLSYRVGTKPSASLRWHQALYLLEFFLPLALILFAIVSI----GLTIRNRGLGGQAGPQRAM--------RVLAMVVAVYTICFLPSIIFGMASMVAFWLSACRSLDLC-TQLFHGSLAFTYLNSVLDPVLYCFSSPNFLHQSRALLGLTRGRQGPVSDESSYQPSRQWRYREASRKAEAIGKLKVQGEVSLEKEGSSQG |
| 2Y02 Chain:A ((17-300)) | -------------------------------------------------------------------------------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATL-VVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDF-VTNRAYAI-----ASSIISFYIPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF--------NRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227212 for 1776 contacts (-127.9/contact) +
2D Compatibility (PS) -25531 + (NN) -12929 + (LL) 6596
1D Compatibility (HY) -26400 + (ID) 3350
Total energy: -288826.0 ( -162.63 by residue)
QMean score : 0.276
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