Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANLDKYTETFKMGSNSTSTAEIYCNVTNVKFQYSLYATTYILIFIPGLLANSAALWVLCRFISKKNKAIIFMINLSVADLAHV------LSLPLRIYYYI--SHHWPFQRALCLLCFYLKYLNMYASICFLTCISLQRCFFLLKPFRARD-WKRRYDVGISAAIWIVVGTACLPFPILRSTDLNNNKSCFADLG----YKQMNAVALVGMITVAELAGFVIPVIIIAWCTWKTTISLRQPPMAFQGISE---RQKALRM-VFMCAAV---FFICFTPYHINFIFYTMVKETIISSCPVVRIALYFHPFCLCLASLCCLLDPILYYFMASEFRDQLSRHGSSVTRSRLMSKESGSSMIG |
| 4BWB Chain:A ((7-317)) | -----------------NSDLDVNTDI----YSKVLVTAIYLALFVVGTVGNGVTLFTLA-------QSLQSRVDYYLGSLALSDLLILLFALPVDLYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISAIWL--ASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTATLRVVIQLNTFMSFLFPMLVAS--ILNTVAARRLTVMV------EPGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFVYISDEQWTTA-LFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACLC--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -274651 for 1931 contacts (-142.2/contact) +
2D Compatibility (PS) -27756 + (NN) -3730 + (LL) 3316
1D Compatibility (HY) -22800 + (ID) 3250
Total energy: -328871.0 ( -170.31 by residue)
QMean score : 0.251
|
|
|