Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AVSCGEVTSSVAPCLGYAMGSAASPSAAC---CSGVRSLNSRAS-----------STADRQATCNCLKSMTGRL----GGGVSMANAANIPSKCGVSVGVPISPTVDCTKIN-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNA--APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE-TGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22709 for 417 contacts (-54.5/contact) +
2D Compatibility (PS) -8625 + (NN) -2091 + (LL) 436
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -35789.0 ( -85.82 by residue)
QMean score : 0.304
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