Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KPVCGVDHYDLIERCYPTTTLT----PPP-------PPSQQCCDIVKRTDLLCLCKYRFMLPTF---G----IDYARAIEVPGKCGIPQPKC
1S6D Chain:A ((21-101))
-----------LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPC
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26599 for 395 contacts (-67.3/contact) +
2D Compatibility (PS) -6384 + (NN) -1364 + (LL) 352
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -37445.0 ( -94.80 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: