Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRKELPKDYSIRMAKSKAEKIQSSNPDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSKQHIRTVV--TIVKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRGSYSSIIGLPLHETYCLLSNYFNLNLY
1EX2 Chain:B ((5-185))
--------LILASQSPRRKELLDLLQL-PYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSI----QAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDYYSVMGLPISKTMRALRHF------
General information:
TITO was launched using:
RESULT:
Template:
1EX2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112584 for 1429 contacts (-78.8/contact) +
2D Compatibility (PS) -19967 + (NN) -7379 + (LL) 1316
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -152614.0 ( -106.80 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1EX2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EX2-query.scw
PDB file :
Tito_Scwrl_1EX2.pdb
: