Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLITLTYNNFKQYAQQGTVPAVEQNNGSKVLQNSFYKSVYYINSVLW-PIKGMLVGVKHDLNTSGITMGRREKVVWGTDAMIAILALQIYYLYSIQELHILCTCQKNYFHISKEQKARNLS
2B9K Chain:A ((1-47))
-----------------AIKLVQSPNGNFAASFVLDGTKWIFKSKYYDSSKGYWVGIYEVWDRK---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 678 for 256 contacts (2.6/contact) +
2D Compatibility (PS) -5239 + (NN) -2140 + (LL) 6804
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -3097.0 ( -12.10 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_2B9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B9K-query.scw
PDB file :
Tito_Scwrl_2B9K.pdb
: