Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFWYHSSKKAARKEEKIDYLDNKLKMFRNIEFIVSAISLAPLIACVFCPVLSEFGLVTLGVNFLVCFVGSLAFHMKHEKKSDNIEKAKEAVNSYNTPPSYFQNPDVGNSFPSASPYGSQYFPFY
1HFE Chain:S ((36-123))
----VKQIKDYMLDRINGVYGADAKFPVRASQD-------NTQVKALYKSYLEKPL-------------GHKSHDLLHTHWFDKSKGVKELTTAGKLPNP--RASEFEGPYPYE-----------
General information:
TITO was launched using:
RESULT:
Template:
1HFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2080 for 365 contacts (-5.7/contact) +
2D Compatibility (PS) -9375 + (NN) -6439 + (LL) 3208
1D Compatibility (HY) 1600 + (ID) 550
Total energy: -13636.0 ( -37.36 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_1HFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HFE-query.scw
PDB file :
Tito_Scwrl_1HFE.pdb
: