Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVPKKSKYRKVFKGRIKGNTKGGSTLSFGDYGLKTIEAGRVQSKHIETVRRVISRTLKRSGKIWIRIFPDTPISKKPTDVRMGKGKGSVEFWVFKAKPGRVLFEISSDVPMHLAKLALEKAMAKLPVKCKFISNYS
1NWY Chain:K ((7-130))
------TKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAG-VTEEQAKEAFRLAGHKLPIQTK------
General information:
TITO was launched using:
RESULT:
Template:
1NWY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 807020 for 5995 contacts (134.6/contact) +
2D Compatibility (PS) -11165 + (NN) -989 + (LL) 1284
1D Compatibility (HY) 3200 + (ID) 550
Total energy: 798800.0 ( 133.24 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_1NWY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NWY-query.scw
PDB file :
Tito_Scwrl_1NWY.pdb
: