Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAEVSNISNLKALDIEKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEIYNFQLGLSYVPGKNNLQYNNLVASGLSYKNG-LSD-DISFTTTLTGEFARGDLADCTNKNPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKL--DSEVSSTYYMNAGVAYRSDSRKLSLTYFSGGQDIIG--------KGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKV--MNNNSGYILLAGLKLIF |
| 3NSG Chain:A ((132-302)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGLLTYRNSDFFGLVDGLSFGIQYQGKNQDNHS---------INSQNGDGVGYTMAYEFDGFGVTAAYSNSKRTNDQQDRDGNGDRAESRAVGAKYDANNVYLAAVYAETRNMSIVENTVTDTVEMANKTQNLEVVAQYQFDFGLRPAISYVQSKGKQLNGAGGSADLAKYIQAGATYYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9218 for 1031 contacts (8.9/contact) +
2D Compatibility (PS) -16400 + (NN) 92 + (LL) 12920
1D Compatibility (HY) 0 + (ID) 1100
Total energy: 4730.0 ( 4.59 by residue)
QMean score : 0.173
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