Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHQTIRVNHAGEYGAICIYYGQKFILK---KSSIINKIIEMEGQEKKHFHYFNGKIKEQKVRPTVLLPVWYVLGVSLGVITAIMGKKAAMACTAAVEEVIGEHYREQVSYLEDGELKEIISKFCNEELEHRDIAIEHNAESALGYNILSSFVKTGCKVAIYLSKLI
3AK8 Chain:A ((31-162))
--ELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAKDEDTADIFTAASRDLDKFLWFIESNIE---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3AK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44714 for 993 contacts (-45.0/contact) +
2D Compatibility (PS) -13338 + (NN) -172 + (LL) 2248
1D Compatibility (HY) 2000 + (ID) 450
Total energy: -54426.0 ( -54.81 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_3AK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AK8-query.scw
PDB file :
Tito_Scwrl_3AK8.pdb
: