Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISLLLVVLLFFCGDDAFAKQEPRSIAADSHIKVINYNPQAIHKYTGFYGYQSSILFEPGETIQNLSMGDPTGWQLVPQGNRLFIKPIDDIADTNATVITNKRVYYFELHAEEATGLDDPRLAYEVRFLYPLFSSDEIYTTNNGDILEQANPTTIPDINDIEVVKKGINFNYSISHVKGSQ-SIIPTKAFDDGRFTYLQFNKV---NSDFPAVFMVDSA-GYESLVNFRTVDDYLIIERVGSVFTLRNGSSTVCLFNENMPFAKGKR |
| 2N01 Chain:B ((12-104)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------RRYYYDYDYA---TRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVVRHGDNVVGLRRNKQK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2N01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57816 for 602 contacts (-96.0/contact) +
2D Compatibility (PS) -9857 + (NN) -4262 + (LL) 10568
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -66917.0 ( -111.16 by residue)
QMean score : 0.534
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