Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIIINHEKNGKLTDFGKAVLSDRYLIE-----NESYQDLFIRIA-NYYSDNKEHAQRLYDYMSNLWFMPSTPILSNGGTNRGLPISCFL-NETEDSLQGIVDLWNENVWLAARGGGIGSYWGNLRSIGESVKGS-GKTSGIVPFIVVQNALTLAISQGSLRR-GSSAVYLPVSHPEIEEFLDIRKPTGGDPNRKALNIHHAVIVDDRFMQAVESDLEWNLISP----------------------YNNKVISTIKARDIWIKILTARIETGEPYIIFLDAINNNKPESYKRLNLD-IKMSNLCSEITLTTGYDHLNKLRTAVCCLSSVNLEYYKEWRHNELF------IEDIMRFLDNVLEDFINKAPDEIQRAKYSAMRERSIGLGVMGFHSFLQSKMVPFESVTAQQWNKKIFKYLRKQADMVSKKLAEEKGA------------------------------CLDAKEINLMERFTHKLAIAPTASISIIAGNTSPGIEPYAANVFTQKTLTGSFVVRNKFLQKLLAEKNQNNDKIWSSISTNEGSVQHLDFLNKHEKLTFRTAYELDQRWIIEHASDRTPYICQSQSVNLFLPANVHKRYLHKIHMLAWKKGLKS-LYYCRSQSMQRADKVSHDIFKASEMFQQRTDIDYSECLSCQ |
| 3HND Chain:A ((131-742)) | LNSAII-YDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQR-ARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQ----NLGTIKCSNLCTEIVEYTSKDEV-----AVCNLASLALNMYVTSEHTYDFKKLAEVTKVVVRNLNKIID--INYYP--VPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNE-SIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHI-AEPNYGKLTSMHFYGWKQGLKTGMYYLRTR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248308 for 4681 contacts (-53.0/contact) +
2D Compatibility (PS) -58816 + (NN) -28570 + (LL) 3148
1D Compatibility (HY) -34000 + (ID) 9350
Total energy: -375896.0 ( -80.30 by residue)
QMean score : 0.392
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