Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYN-HPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGH-HEGNVIMGQK--GMH-LNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFG--ALGEKLGKGKT-LKHGDDV-IPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMND-RKQSVDIMTHHFK---QS--RDVLTQSAAW----TSYG---DLTIKPSGYQEITTLVKQHHLF-NPPAYDDFVEPSLYKEASRS |
| 3IX1 Chain:A ((3-300)) | --------------------------------ETVEVMLDWYPNAVHTFLYVAIE--NGYFAEEGLDVDIVFPTNPTDPIQLTASGAIPLALSYQPDVILARSKDLPVVSVASVVRSPLNHVMFLAEQDFDSPADL---VGLTVGYPG-IPVNEPILKTMVEAAGGDYEQVHLMDVGF-ELGASIVSGRADAVVGTYINHEYPVLKHEG-HDISYFNPVDYGVPEYDELVLISNEAYVEESGEVLAAFWRAALKGYEWMVENPDEALNVLLTNQDEANFPLIQEVEEESLSILLEKMENPNGPFGGQDAESWEEVISWLDAHDWLEQPVVAEDAFSSI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96293 for 2367 contacts (-40.7/contact) +
2D Compatibility (PS) -29895 + (NN) -15187 + (LL) 3560
1D Compatibility (HY) -12000 + (ID) 1850
Total energy: -151665.0 ( -64.07 by residue)
QMean score : 0.520
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