Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEKVARFNKQHFVVGLKETLKALKKDQVTSLIIAEDVEVYLMTRVLSQI-NQKNIPVSFFKSKHALGKHVGINVNATIVALIK
2HVY Chain:D ((36-104))
----------------GTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIE
General information:
TITO was launched using:
RESULT:
Template:
2HVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49632 for 463 contacts (-107.2/contact) +
2D Compatibility (PS) -7370 + (NN) -1179 + (LL) 1644
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -61487.0 ( -132.80 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_2HVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HVY-query.scw
PDB file :
Tito_Scwrl_2HVY.pdb
: