Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDIINKLQAFADANPQSIAVRHTTDELTYQQLMDESSKLA-HRLQGSKKPMI---LFGHMSPYMIVGMIGAIKAGCGYVPVDTSIPEDRIKMIINKVQPEFVFNTTDESFESLEGEVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYASLVQFTEWMLELNKS----GNKQQWLNQAPFSFDLSVMAIYPCLASGGTLNLVDKNMINKPKLLNEMLTATPIN-IWVSTPSFMEMCLLLPTLNEEQYGSLNEFFFCGEIL--PHRAAKALVSRFPSATIYNTYGPTEATVAVTSIQITQEILDQYPTLPVGVERLGARLSTTDD-----------GELVIEGQSVSLGYLKNDQKTAEVF----NFDDGIRTYHTGDKAKF-ENGQWFIQGRIDFQIKLNGYRMELEEIETQLRQSEFVKEAIVVPVYKNDKVIHLIGAIVPTTEVTDNAEMTKNIKNDLKSRLPEYMIPRKFEWMEQLPLTSNGKIDRKKIAEVING |
| 4DG9 Chain:A ((29-519)) | ---VVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPANGLPCVPVRHLPAAPASVARPCFAADQ-IAYINFSSGTTGRPKAIACTHAGITRLC-----LGQSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLGPLD-PGVLRQLIGERGADSAWLTASLFNT----LVDLDPDCLGGLRQLLTGGDILSVPH-VRRALL-RHPRLHLVNGYGPTENTTFTCCHVVTDDDLEE-DDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALL-VRERNGVKQLLCAWTGKADASPQA---------LLRQLPTWQRPHACVRVEALPLTAHGKLDRAAL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233533 for 3771 contacts (-61.9/contact) +
2D Compatibility (PS) -48222 + (NN) -16332 + (LL) 2412
1D Compatibility (HY) -23200 + (ID) 6000
Total energy: -324875.0 ( -86.15 by residue)
QMean score : 0.493
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