Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDLTMLLDELKDMSFFNKGDICLIGCSTSEVIGEKIGTVGSM-----EVAETIFNALDVV----SKETGVTFAFQGCEHINRAITIEKSQYNPLTMEEVSVVPDVHAGGSLATYAFQHMKDPIVVEHITVPCGIDIGQTLIGMHIKHVCVPVRTSVKQVGQAIVTIATSRPKKIGGERAKYK |
3E4C Chain:A ((107-198)) | -SDMTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQAARGDSPGV-------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -17145 for 408 contacts (-42.0/contact) +
2D Compatibility (PS) -8179 + (NN) -3447 + (LL) 7184
1D Compatibility (HY) 800 + (ID) 600
Total energy: -21387.0 ( -52.42 by residue)
QMean score : 0.169
|
|
|