Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALDKKVYATINGFPFNSQLKLLEEHLYKMAELEPDAFIIAAPG---------VIKLASKIAP-HIPVHLSTQANVLNTLDAQVFYDLGVKRIVCARELSLNDAVEIKKALPDLELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSGHIAEILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNTAYEIIAPKNAAITPIVNDIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQVRV |
| 3QJA Chain:A ((124-246)) | -----------QPYQIHEARAHGADMLLLIVAAL----------EQSVLVSMLDRTESLGMTALVEVHT---EQEAD-------RALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGV--RGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -64994 for 838 contacts (-77.6/contact) +
2D Compatibility (PS) -12234 + (NN) -3903 + (LL) 18816
1D Compatibility (HY) 400 + (ID) 650
Total energy: -62565.0 ( -74.66 by residue)
QMean score : 0.448
|
|
|