Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLEKLIERVLFATRWLLAPLCIAMSLVLVVL----GYVFMKELWHMLSHLDTISETD---LVLSALG-----LVDLLFMAGL----------------VLMVLLASYESFVS------KLDKVDASEITWLKHTDFNALKLKVSLSIVAISA-------IFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHL------VFVCSALLTAVTNNIAFSQKERH |
| 4U8U Chain:M ((3-224)) | TYKDRRFQYILTNQHLFIDKLERDLHEIDDEFKKLGSDVKDQTVRHLKARISNLEGDDCKEHEAPCGGDVPQCISDLFFCDGHKDCKNGRDEDKEVCSEVPADIGSSFAGVVSWQACEEATPHHAVVTITANERKEFFKPRIWVRAILAFEEEEHEHHIKTFQLRGYYSFGDRTLALGPER--GTKPVY-GVRCHFDRGDDDHADCQIVNPASLFVCGNFAAERH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80020 for 1079 contacts (-74.2/contact) +
2D Compatibility (PS) -18629 + (NN) 346 + (LL) 192
1D Compatibility (HY) -800 + (ID) 1550
Total energy: -100461.0 ( -93.11 by residue)
QMean score : -0.034
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