Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPDRRVSKTRAAKRRTHYSVKLAKPV-KAKDGTWKL-----PHHINKFTKEY
2HF1 Chain:A ((6-34))
------------------------LEILVCPLCKGPLVFDKSKDELICKGDRLA
General information:
TITO was launched using:
RESULT:
Template:
2HF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11991 for 95 contacts (126.2/contact) +
2D Compatibility (PS) -2467 + (NN) -359 + (LL) 2052
1D Compatibility (HY) -400 + (ID) 100
Total energy: 10717.0 ( 112.81 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_2HF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HF1-query.scw
PDB file :
Tito_Scwrl_2HF1.pdb
: