Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTLGRFLRLTTFGESHGDMIGGVLDGMPSGIKIDYDLLENEMKRRQGGRNIFTTPRKEDDKVEITSGVFEGFSAGTPIGFLIHNQRARSKDYDNIKNLFRPSHADFTYFHKYGIRDFRGGGRSSARESAIRVAAGAFAKMLLREIGVVCESGIIKIGGIEAKN----YDFNHALKSEIFALDKEQEEAQKTAIQNAIKNHDSIGGVALIRARGAKTNQKLPIGLGQGLYAKLDAKIAEAMMGLNGVKAVEIGKGVESSLLKGSEYNDLMSQKGFLSNHSGGVLGGMSNGEEIIVKVHFKPTPSIFQPQRTIDIKGNECECLLKGRHDPCIAIRGSVVCESLLSLVLADMVLLNLTSKIEYLKTIYNEN |
1SQ1 Chain:A ((1-359)) | MNTFGTRLKFTSFGESHGVAVGCIIDGMPAGVKFDEEFLQNELDKRKG------------DKAQVLSGVFEGYTTGHPIAIVVF----------------------------------------SARESVARVAGGAVAAMLLREFDICVQSGVFGVGTFVSNLKEEEFDFEFAKKSEIFCLDPKLESDFKNEILNARNSKDSVGAAVFTKVSG------MLIGLGEVLYDKLDSKLAHALMGINAVKAVEIGEGINASKMRGSCNNDALKDGKFLSNHSGGILGGISNGENLILKTYFKPTP---------------------GRHDPCVGVRGSVVASAMVRLVLADCLLLNASANLNNLKNAYG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158736 for 2386 contacts (-66.5/contact) +
2D Compatibility (PS) -31411 + (NN) -19722 + (LL) 3440
1D Compatibility (HY) -27200 + (ID) 7300
Total energy: -240929.0 ( -100.98 by residue)
QMean score : 0.533
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