Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNEVQGIGIPTSHASVQTTPTKEISRTNTINTVDESKTTIDPDQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLVVSVKDANG-DKVIREIPSKEAVELMQRMRDVIGIIFDKRG
1YE8 Chain:A ((110-168))
------------------------------------------------KMELFSKKFRDLVRQIMHDPNVNVVATI-----PIRDVHPLVKEIRRLPGAVLIELTPENRDVILEDILSLL
General information:
TITO was launched using:
RESULT:
Template:
1YE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1409 for 274 contacts (-5.1/contact) +
2D Compatibility (PS) -5828 + (NN) 1116 + (LL) 2676
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -9245.0 ( -33.74 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1YE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YE8-query.scw
PDB file :
Tito_Scwrl_1YE8.pdb
: