Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKIVQGALDTDKLLKDYQEEACTKNFGAFCVFVGIVREEGNVQGLSFDIYEALLKTWFEKWRHQPKDLG-VVLKMAHSVGDVLIRHSSFLCVLMGANTKNALKLYEYFFKNFKRNAPIWKCYLSDNERIYAKKKDHLLKGSGLLA
2O5A Chain:A ((4-62))
-------------------------------------------------------QELLQLAVNAVDDKKAEQVVALNMKGISL----DFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQARWVLIDLGDVVVHVFHK
General information:
TITO was launched using:
RESULT:
Template:
2O5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9982 for 310 contacts (-32.2/contact) +
2D Compatibility (PS) -5906 + (NN) -2090 + (LL) 4720
1D Compatibility (HY) 800 + (ID) 350
Total energy: -12808.0 ( -41.32 by residue)
QMean score : 0.140
(partial model without unconserved sides chains):
PDB file :
Tito_2O5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O5A-query.scw
PDB file :
Tito_Scwrl_2O5A.pdb
: