Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKAGFLFLAAMAIIVVSLNAKDPNVLRKIVFEKCLPNYEKNQNPSPCIEVKPDAGYVVLKDI--NGPLQYLLMPTTHISGIENPLLLDPSTPNFFYLSWQARDFMSKKYGKPIPDYAISLTINS--KKGRSQNHFHIHISCISLDVRKQLDNNLKNINSRWSPLSGGLNGHKYLARRVTESELAQKSPFVMLAKEVPNAHKRMGDYGLAVVQQSDNSFVLLATQFNPLTLNRASAEEIQDHECAILR |
| 1EMS Chain:A ((316-395)) | ------------------------------------------------------PHSFVFVNLKPVTDGHVLVSPKRVVPRLTD--LTD----AETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFPRSNEQMAEEAVVYRNLM---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42229 for 465 contacts (-90.8/contact) +
2D Compatibility (PS) -8220 + (NN) -3820 + (LL) 8576
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -48693.0 ( -104.72 by residue)
QMean score : 0.382
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