Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVVLHSHLENALNQLKELIDLTERDIRDIKLAKHAEIFERNHQKQLAIQAFEQEKTNIDAQMLSLKN-----------QFPNKEMSELLDEKTSDFLNQMREFLLVLKEKNLIYSRMAFAVSEFYSSLIQQIIPHDTCDYKGSRHVGSHFLRVQA |
1C1C Chain:A ((450-530)) | --------------------------RETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVNQIIE-QLIKKEKVYLAWVPAH------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36040 for 396 contacts (91.0/contact) +
2D Compatibility (PS) -6880 + (NN) 3445 + (LL) 5368
1D Compatibility (HY) 4800 + (ID) 300
Total energy: 42473.0 ( 107.26 by residue)
QMean score : -0.165
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