Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTKNKRYTVLRSPHVNKDSREQFEIRVYSRLIDIISATPETVDSLMKLDLAPEVDVEVTSMETK
2F4V Chain:J ((3-100))
--KIRIKLRGFDHKTLDASAQKIVEAARRSGAQVSGPIPLPTRVRRFTVIRGPFKHKDSREHFELRTHNRLVDIINPNRKTIEQLMTLDLPTGVEIEIKT----
General information:
TITO was launched using:
RESULT:
Template:
2F4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38013 for 590 contacts (-64.4/contact) +
2D Compatibility (PS) -10062 + (NN) 1279 + (LL) 740
1D Compatibility (HY) -8000 + (ID) 2500
Total energy: -56556.0 ( -95.86 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2F4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F4V-query.scw
PDB file :
Tito_Scwrl_2F4V.pdb
: