Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQGLNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYF----LLDDIITTGTTLKEALKYLKTLNIKAHFAIALCSADE |
2YKP Chain:A ((171-220)) | ----------------------------------------------------------------------------------------------------------------------------------KNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPALKELLK--EALNM------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14996 for 244 contacts (-61.5/contact) +
2D Compatibility (PS) -4776 + (NN) -551 + (LL) 10668
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -15705.0 ( -64.36 by residue)
QMean score : 0.435
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